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Summarises the number and size of "PASS" segments per chromosome from a CNV annotation file.

Usage

BafQC(annofile, out_dir, prefix)

Arguments

annofile

Path to the CNV annotation file (e.g., *_CNV_annotation.tsv).

out_dir

Path to QC output file.

prefix

Prefix of QC output file.

Value

Invisibly returns the summary data frame.