Calculate Segment Mean Adjusted by Scale Factor
Usage
CalSM(Segcov, max_L_mu, gender, Chromosome)
Arguments
- Segcov
Numeric. The observed segment coverage.
- max_L_mu
Numeric. The scale factor (mu).
- gender
Character. "male" or "female".
- Chromosome
Character. Chromosome name (e.g., "1", "X", "Y").
Value
Numeric. The adjusted segment mean (log2 ratio).
Examples
CalSM(Segcov = 150, max_L_mu = 1, gender = "female", Chromosome = "1")
#> [1] 0.5849625
