Assign Copy Number Call With Model (Major/Minor)
Usage
CallWTModel(minor, major, CNF_correct, Chromosome, gender)
Arguments
- minor
Integer. Minor allele copy number.
- major
Integer. Major allele copy number.
- CNF_correct
Numeric. Corrected CNF.
- Chromosome
Character. Chromosome name.
- gender
Character. "male" or "female".
Value
Character. Copy number call: "GAIN", "LOSS", "REF", "GAINLOH", or "CNLOH".
